Job ID: 176957
Job date: 2018-02-07
End Date:
Company : Providence Health & Services Country : Role : Other
Job date: 2018-02-07
End Date:
Company : Providence Health & Services Country : Role : Other
Job Description:
Providence is calling a full time, day shift Junior Bioinformatician to Providence John Wayne Cancer Institute Santa Monica, CA. In this position you will: Provide analysis and computing support for cancer-related research including microarray and next-generation sequencing (NGS) data (genomic, transcriptomic, epigenomic, and proteomic) analysis. Qualifications: Required qualifications for this position include:
Additional Info:
About the hospital you will serve: The John Wayne Cancer Institute at Providence Saint John’s Health Center is a cancer research institute dedicated to the understanding and curing of cancer in order to eliminate patient suffering worldwide. The Institute's mission is accomplished by conducting innovative research focused on biological mechanisms to provide new understandings of the cause, diagnosis, control, and cure of cancer; training the next generation of surgical scientists who study and treat cancer; and researching unique experimental treatment services to rapidly develop and test new forms of diagnosis and therapy in order to improve the quality of life and expected survival of those afflicted with cancer. We offer a full comprehensive range of benefits - see our website for details http://www.providenceiscalling.jobs/rewards-benefits/ Our Mission As people of Providence, we reveal God's love for all, especially the poor and vulnerable, through our compassionate service. About Us Providence Health & Services is the third largest not-for-profit health system in the United States. Providence employs more than 82,000 caregivers (employees) across a five-state area; AK, WA, MT, OR, and CA. Our facilities include 34 hospitals, 600 physician clinics, senior services, supportive housing and other health and educational services. Providence is proud to be an Equal Opportunity Employer. Providence does not discriminate on the basis of race, color, gender, disability, veteran, military status, religion, age, creed, national origin, sexual identity or expression, sexual orientation, marital status, genetic information, or any other basis prohibited by local, state, or federal law. Schedule: Full-time Shift: Day Job Category: Research Location: California-Santa Monica Req ID: 176957[Click Here to Access the Original Job Post]
Providence is calling a full time, day shift Junior Bioinformatician to Providence John Wayne Cancer Institute Santa Monica, CA. In this position you will: Provide analysis and computing support for cancer-related research including microarray and next-generation sequencing (NGS) data (genomic, transcriptomic, epigenomic, and proteomic) analysis. Qualifications: Required qualifications for this position include:
- Bachelor’sDegree or higher in Biology, Bioinformatics, Computational Biology, or a related field
- Experience in processing and managing raw data generated from:
- Expression, SNP, and DNA methylation microarrays.
- Whole-genome and targeted (exome and/or gene panel) sequencing.
- Transcriptomic (mRNA-seq and smRNA-seq) sequencing.
- Epigenomic (Methyl-seq and ChIP-seq) sequencing.
- Other Next Generation Sequencing (NGS) techniques
- Experience with NGS data generated on Illumina sequencing instruments, including the HiSeq and MiSeq platforms.
- Experienceusing open source genomic analysis tools including SAMtools, Picard, GATK, BWA, MuTect, BEDtools, VCFtools, among others.
- Experienceusing open source tools for the annotation and interpretation of genomic variants, such as ANNOVAR, VEP, SnpEff, among others.
- Experiencein transcriptome analysis, including differential expression analysis using DESeq2, edgeR, limma, or similar.
- Experience in and understanding of the organization and utilization of public databases such as The Cancer Genome Atlas (TCGA), Gene Expression Omnibus (GEO-NCBI), ENCODE project, ArrayExpress (EMBL-EBI) among others.
- Experienceworking with large-scale NGS data in high performance cluster computing environments.
- Experience in at least one of the following scripting languages: bash, Python, or Perl.
- Knowledge of basic genetics.
- Knowledge of basic statistics.
- Experiencein statistical analysesusing R/Bioconductor.
- Unix/Linux system administration experience.
- Experienceusing cloud computing platforms such as Amazon and/or Google.
- Experienceusing Cancer Genomics Cloud (CGC) resources.
- Knowledgeof human genetics.
- Knowledge of cancer and molecular biology.
- Publications that demonstrate knowledge and application of genomic analyses.
Requeriments :
Skills :
- Cancer biology
- Cloud Computing
- Genetics
- genomic
- Human Genetics
- Lunix/Unix
- Microarray
- molecular biology
- Next Generation Sequencing
- Programing in Python
- Programming in PERL
- Programming in R
- RNA-seq
- Statistics
- Transcriptomics
Areas :
Additional Info:
About the hospital you will serve: The John Wayne Cancer Institute at Providence Saint John’s Health Center is a cancer research institute dedicated to the understanding and curing of cancer in order to eliminate patient suffering worldwide. The Institute's mission is accomplished by conducting innovative research focused on biological mechanisms to provide new understandings of the cause, diagnosis, control, and cure of cancer; training the next generation of surgical scientists who study and treat cancer; and researching unique experimental treatment services to rapidly develop and test new forms of diagnosis and therapy in order to improve the quality of life and expected survival of those afflicted with cancer. We offer a full comprehensive range of benefits - see our website for details http://www.providenceiscalling.jobs/rewards-benefits/ Our Mission As people of Providence, we reveal God's love for all, especially the poor and vulnerable, through our compassionate service. About Us Providence Health & Services is the third largest not-for-profit health system in the United States. Providence employs more than 82,000 caregivers (employees) across a five-state area; AK, WA, MT, OR, and CA. Our facilities include 34 hospitals, 600 physician clinics, senior services, supportive housing and other health and educational services. Providence is proud to be an Equal Opportunity Employer. Providence does not discriminate on the basis of race, color, gender, disability, veteran, military status, religion, age, creed, national origin, sexual identity or expression, sexual orientation, marital status, genetic information, or any other basis prohibited by local, state, or federal law. Schedule: Full-time Shift: Day Job Category: Research Location: California-Santa Monica Req ID: 176957[Click Here to Access the Original Job Post]