Job Description:
The Computational Bioinformatics Faculty at Sanford will provide support in computational analysis of or the logical and technical processes necessary for building databases and conducting analyses of phenome, metabolome, glycome, lipidome, inflamome, transcriptome, epigenome, and genome, as well as assist with or guide the integration of such with electronic medical record platforms. He or she will also have a proven track record of innovation in one or more these. The computational and database systems developed by the applicant will be used to gather, generate, and track patient data and develop medically actionable hypotheses. Familiarity with security and privacy requirements applicable for working with patient data in a medical environment and in the development of appropriate ethically and legally compliant policies is desirable.The successful candidate will lead the bioinformatics group at Sanford and be responsible for its budge and management as well as its clinical and research obligations. He or she provided startup funding appropriate to the agreed upon research program and will have full membership in Sanford Research and access to its infrastructure. The successful candidate will be eligible for academic appointment at South Dakota State University and the University of South Dakota at a level appropriate for his or her academic credentials. He or she will report to the Imagenetics Research Director and the Medical Director of the diagnostic laboratory. QUALIFICATIONS Ph.D. or M.D. is required. At least 6 years experience in bioinformatics or a closely related field is required and at least 2 of those years must have been in a managerial/leadership position. Demonstrated record of budget management and mentoring is required. Experience in the analysis of high-throughput DNA and RNA sequencing data, including alignment, quality measurements, variant calling, variant annotation, variant prioritization, incidental findings reporting, and transcript quantification is required. Facility with collection of the human phenome and application of it to analysis of human sequence data is required. Computational experience could include demonstrated database management, process management, or next generation sequence analysis. Also, experience with electronic medical record (EMR) APIs and interfaces and movement of data out of and into EMRs is highly desirable. Experience programing in Python, Perl, R, and Java desirable. Experience with the integration and management of multiple data sources, workflows and enabling integrated management of and reporting on those data and processes through graphical user interfaces is desirable. Preference will be given to individuals with expertise in database vitalization, genetic/epigenetic analyses and medical and/or research informatics experience. Essential to the applicants successful fulfillment of this role is a documented track record of fiscal, managerial, academic and technical leadership and productivity; measures will include publications and independent funding.
Additional Info:
About Sanford Health: At Sanford Health, we are dedicated to the work of health and healing. Every day, we show that commitment by delivering the highest quality of care to the communities we serve. We are leaders in health care and strive to provide patients across the region with convenient access to expert medical care, leading-edge technologies and world-class facilities. In addition to strong clinical care, we are also committed to research, education and community growth. We engage in medical research to not only discover innovative ways to provide care, but also cures for common diseases. We continuously seek new ways to achieve our vision of improving the human condition here in your community, across the region and around the world. The entire team at Sanford Health recognizes the value of healthy families and communities. We continue to gain momentum and expand our reach. Together, we can make a positive difference now, and in the future. Sanford is an EEO/AA Employer M/F/Disability/Vet. If you are an individual with a disability and would like to request an accommodation for help with your online application, please call 1-877-243-1372 or send an email to talent@sanfordhealth.org In compliance with federal law requiring employers to verify new employees' U.S. employment eligibility, Sanford participates in E-Verify. To learn more click here for English Version at https://e-verify.uscis.gov/emp/media/resourcesContents/EverifyPosterEnglish.pdf or here for Spanish Version at https://e-verify.uscis.gov/emp/media/resourcesContents/EverifyPosterSpanish.pdf .[Click Here to Access the Original Job Post]
The Computational Bioinformatics Faculty at Sanford will provide support in computational analysis of or the logical and technical processes necessary for building databases and conducting analyses of phenome, metabolome, glycome, lipidome, inflamome, transcriptome, epigenome, and genome, as well as assist with or guide the integration of such with electronic medical record platforms. He or she will also have a proven track record of innovation in one or more these. The computational and database systems developed by the applicant will be used to gather, generate, and track patient data and develop medically actionable hypotheses. Familiarity with security and privacy requirements applicable for working with patient data in a medical environment and in the development of appropriate ethically and legally compliant policies is desirable.The successful candidate will lead the bioinformatics group at Sanford and be responsible for its budge and management as well as its clinical and research obligations. He or she provided startup funding appropriate to the agreed upon research program and will have full membership in Sanford Research and access to its infrastructure. The successful candidate will be eligible for academic appointment at South Dakota State University and the University of South Dakota at a level appropriate for his or her academic credentials. He or she will report to the Imagenetics Research Director and the Medical Director of the diagnostic laboratory. QUALIFICATIONS Ph.D. or M.D. is required. At least 6 years experience in bioinformatics or a closely related field is required and at least 2 of those years must have been in a managerial/leadership position. Demonstrated record of budget management and mentoring is required. Experience in the analysis of high-throughput DNA and RNA sequencing data, including alignment, quality measurements, variant calling, variant annotation, variant prioritization, incidental findings reporting, and transcript quantification is required. Facility with collection of the human phenome and application of it to analysis of human sequence data is required. Computational experience could include demonstrated database management, process management, or next generation sequence analysis. Also, experience with electronic medical record (EMR) APIs and interfaces and movement of data out of and into EMRs is highly desirable. Experience programing in Python, Perl, R, and Java desirable. Experience with the integration and management of multiple data sources, workflows and enabling integrated management of and reporting on those data and processes through graphical user interfaces is desirable. Preference will be given to individuals with expertise in database vitalization, genetic/epigenetic analyses and medical and/or research informatics experience. Essential to the applicants successful fulfillment of this role is a documented track record of fiscal, managerial, academic and technical leadership and productivity; measures will include publications and independent funding.
Requeriments :
Skills :
- DNA sequencing
- Genetics
- Next Generation Sequencing
- Programing in Python
- Programming in Java
- Programming in PERL
- Programming in R
- RNA-seq
Areas :
Additional Info:
About Sanford Health: At Sanford Health, we are dedicated to the work of health and healing. Every day, we show that commitment by delivering the highest quality of care to the communities we serve. We are leaders in health care and strive to provide patients across the region with convenient access to expert medical care, leading-edge technologies and world-class facilities. In addition to strong clinical care, we are also committed to research, education and community growth. We engage in medical research to not only discover innovative ways to provide care, but also cures for common diseases. We continuously seek new ways to achieve our vision of improving the human condition here in your community, across the region and around the world. The entire team at Sanford Health recognizes the value of healthy families and communities. We continue to gain momentum and expand our reach. Together, we can make a positive difference now, and in the future. Sanford is an EEO/AA Employer M/F/Disability/Vet. If you are an individual with a disability and would like to request an accommodation for help with your online application, please call 1-877-243-1372 or send an email to talent@sanfordhealth.org In compliance with federal law requiring employers to verify new employees' U.S. employment eligibility, Sanford participates in E-Verify. To learn more click here for English Version at https://e-verify.uscis.gov/emp/media/resourcesContents/EverifyPosterEnglish.pdf or here for Spanish Version at https://e-verify.uscis.gov/emp/media/resourcesContents/EverifyPosterSpanish.pdf .[Click Here to Access the Original Job Post]