Job Description:
We are seeking an energetic individual for a mid level Bioinformatic Engineer position who can work as part of a team of Bioinformaticians at our San Diego, CA office. The successful applicant will need to:
Additional Info:
Viome is a wellness as a service company that applies artificial intelligence and machine learning to biological data – e.g., microbiome, transcriptome and metabolome data – to provide personalized recommendations for healthy living. We are a small, interdisciplinary and passionate team of experts in biochemistry, microbiology, medicine, artificial intelligence and machine learning. [Click Here to Access the Original Job Post]
We are seeking an energetic individual for a mid level Bioinformatic Engineer position who can work as part of a team of Bioinformaticians at our San Diego, CA office. The successful applicant will need to:
- Quickly learn the structure of the existing software.
- Run, monitor and troubleshoot existing Bioinformatic workflows.
- Assist in the maintenance, development , optimization and scaling of pipelines and tools for NGS data analysis.
- Must be able to legally work in the US.
- Candidates with a BS degree in Bioinformatics with several (3+) years of industry experience, or MS in Bioinformatics with 2+ years of industry experience.
- 2+ years experience with Python Programing.
- 2+ years experience working with AWS ecosystem (EC2, S3, Lambda).
- 2+ years experience Experience working with NGS data, workflows and common bioinformatics tools (bwa/bowtie, samtools, bedtools).
- 2+ years experience working Postgres (desired) or other relational sql based DB.
- Expertise in Linux and Shell programming.
- Familiarity with source code revision control such as git, svn or related systems.
- Experience working with containers such as Docker.
- Expertise in multiple programing languages: C++ , Perl , R.
- Experience in the development of bioinformatics tools for genomic data analysis.
- Experience in the development of bioinformatic pipelines and workflows.
- Experience in the validation and optimization of bioinformatic tools .
- Experience with transcriptomic or meta-transcriptomic data and analysis.
- Familiarity with and experience in the use of NCBI and other common gene, protein and pathway annotations sources and databases.
- Familiarity with microbial, metabolomics or human genomics literature
- Experience with of taxonomy and taxonomic classification systems.
Requeriments :
Skills :
- Bioinformatics
- Lunix/Unix
- Next Generation Sequencing
- Programing in C++
- Programing in Python
- Programming in PERL
- Programming in R
- Shell scripting
- Transcriptomics
Areas :
Additional Info:
Viome is a wellness as a service company that applies artificial intelligence and machine learning to biological data – e.g., microbiome, transcriptome and metabolome data – to provide personalized recommendations for healthy living. We are a small, interdisciplinary and passionate team of experts in biochemistry, microbiology, medicine, artificial intelligence and machine learning. [Click Here to Access the Original Job Post]