Bioinformatics Analyst I – CPDM

Posted on by Micaela Brun
Job ID:
Job date: 2018-02-03
End Date:

Company : Dana-Farber Cancer Institute 

Country :

Role : Other 


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Job Description:

  • Develop computational and systems strategies for data capturing, storing, searching and analyzing across various high-throughput genomic, transcriptomic, epigenomic, and molecular data.
  • Design and implement strategy to synchronize databases from various collaborating partners to generate an integrated database-driven web resources amendable for robust data exploration, visualization, and discovery applications.
  • Develop automation in capturing and creating data, reports, and summaries from electronic clinical and research records and databases.
  • Support the development of bioinformatics web applications.
  • Modify database designs to meet the requirement of new clinical/research projects.
  • Manage and maintain data update on project databases.
  • Support the development of data processing and analysis pipelines for Next Generation Sequencing data.
Qualifications:
  • BS in Computer Science, Engineering, Bioinformatics, Data Science, or related fields. 1-2 years of relevant experience is required.
  • Basic understanding of NSG data outputs, data management and analysis. Background in Molecular Biology and Genetics is a plus.
  • Experience with data collection and management, and database design and management.
  • Experience with standards on clinical and research data procedures.
  • Familiar with data management software/application such as REDCap, DatStat, LIMS, and Tableau.
  • Experience with programming in Python and R and familiarity with MATLAB, Java, C++, Perl, web-development, and database query through SQL
  • Experience in developing pipelines in analyzing NGS data and familiarity with common bioinformatics resources such as bwa, BEDtools, GATK, IGC and cancer genomics resources such as cBioPortal.

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Additional Info:

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