Bioinformatics Scientist

Posted on by Charlie Johnson
Job ID:
Job date: 2014-10-06
End Date:

Company : PCLS 

Country :

Role : Research Scientist 

Job Description:
POSITION SUMMARY Provide technical expertise in analysis of high-throughput data associated with the development of a comprehensive bladder cancer diagnostic assay. Work within the Molecular Diagnostics group to develop and maintain automated tools for processing and interpreting experimental data from NGS and additional platforms in support of the internal R&D program. General Qualifications Minimum Education And/or Certification

  • PhD degree in Bioinformatics or related field; or MS with 3+ years of experience
Required Experience
  • Experience in processing of high-volume NGS data and analysis
  • Competence with bioinformatics techniques associates with gene expression, microarray and next gen sequencing
  • Experience in working with bioinformatics portals/databases such us UCSC Genome Browser, NCBI Entrez, dbSNP
  • Experience in cancer research, including a working understanding of computation approaches for cancer genome analysis, is highly desirable
  • Working knowledge of Python/Perl or other scripting language
Required Skills
  • Ability to work in a multidisciplinary, fast-paced, dynamic and results-oriented startup environment
  • Ability to present data to a multidisciplinary audience in a clear and cohesive manner
  • High energy level, a driving sense of urgency and a “can do” orientation
  • Excellent teamwork, time management and organizational skills
  • Working knowledge of Python/Perl or other scripting language
  • Ability to understand and modify existing code, as well as develop new scripts
  • Strong scientific understanding of molecular biology and genomics
Physical Demands/Work Environment Requirements Vision, hearing, speech, movements requiring the use of wrists, hands and/or fingers. Must have the ability to view a computer screen for long periods and the ability to sit for extended periods.  Keen visual acuity with the ability to recognize colors and patterns.  Must have the ability to work the hours and days required to complete the essential functions of the position, as scheduled. Must have the ability to lift and maneuver up to 25 pounds. Mental Demands Learning, thinking, concentration and the ability to work under pressure, particularly during busy times.   Must be able to pay close attention to detail and be able to work as a member of a team to ensure excellent customer service.  Must have the ability to interact effectively with co-workers and customers, and exercise self-control and diplomacy in customer and employee relations’ situations.  Must have the ability to exercise discretion as well as appropriate judgments when necessary.  Must be proactive in finding solutions. ESSENTIAL FUNCTIONS And BASIC DUTIES ·         Work with a group of computational and molecular biologists focused on the use of massively parallel sequencing technology for the characterization of genetic alterations present in cancer DNA and protein samples·         Develop, maintain and analyze QC metrics to support internal R&D and identify common failure modes·         Process, analyze and interpret high volumes of data as part of internal and external scientific studies·         Develop automated methods and internal software to support large-scale bioinformatics analysis·         Provide statistical support and experimental design to identify candidate biomarkers·         Prepare and deliver presentations based on scientific and technical progress/innovations·         Work independently and prepare timetables, deliverables, and project schedules·         Design data storage architectures and formats to enable ongoing access and re-analysis of sample data over tome ADDITIONAL RESPONSIBILITIES
  • Ensures adherence to all State and Federal guidelines and regulations including compliance with CLIA and CAP regulations
  • Performs other duties as required

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