Job ID: 438660953
Job date: 2017-09-03
End Date:
Company : Baptist Health South Florida Country : Role : Programmer
Job date: 2017-09-03
End Date:
Company : Baptist Health South Florida Country : Role : Programmer
Job Description:
Implement and execute computational analysis of cancer genomes, high-throughput sequencing datasets, genomic profiling datasets and other sequencing and array based analysis. Manage and organize large high-throughput sequencing data sets. Write scripts in various coding languages for the reliable assessment of genomics and epigenomes datasets. Organize and accurately maintain written records of experimental procedures and data collection. Perform basic maintenance on laboratory computational equipment. Coordinate all IT hardware or software changes through the IT Business Intelligence and Decision Support product line. Adhere to IT Change Management Control Methodology. Through understanding of CAP and CLIA compliance and audit response. Experience in quality assurance procedure for bioinformatics resources. Bachelor's degree in biological science or computer science related field required. Master's degree in Bioinformatics or related discipline is a plus. Previous working experience in a clinical cancer diagnosis is required. Programming skills including scripting in Python, Perl, R, C , Java, MySQL, NOSQL. Thorough understanding of Unix and Linux system management , resource management within a cluster configuration management. Experience in the hardware selection and implementation for high performing computing. Thorough understanding of network bandwidth and troubleshooting high performance computing systems. Proficiency using next-generation sequencing data analysis tools including GSNAP, BWA, MIRRA, Bowtie, Cufflinks, Stampy , GATK, Freebayes, SNPeff, Pindel. Familiarity with commonly used algorithms for alignment and variant calling. At least 3 years experience in molecular diagnostic techniques including NGS, RNA-seq, and other molecular techniques. Strong Analytical skills. Excellent communication skills (verbal and written) required. Strong statistical understanding.
Additional Info:
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Implement and execute computational analysis of cancer genomes, high-throughput sequencing datasets, genomic profiling datasets and other sequencing and array based analysis. Manage and organize large high-throughput sequencing data sets. Write scripts in various coding languages for the reliable assessment of genomics and epigenomes datasets. Organize and accurately maintain written records of experimental procedures and data collection. Perform basic maintenance on laboratory computational equipment. Coordinate all IT hardware or software changes through the IT Business Intelligence and Decision Support product line. Adhere to IT Change Management Control Methodology. Through understanding of CAP and CLIA compliance and audit response. Experience in quality assurance procedure for bioinformatics resources. Bachelor's degree in biological science or computer science related field required. Master's degree in Bioinformatics or related discipline is a plus. Previous working experience in a clinical cancer diagnosis is required. Programming skills including scripting in Python, Perl, R, C , Java, MySQL, NOSQL. Thorough understanding of Unix and Linux system management , resource management within a cluster configuration management. Experience in the hardware selection and implementation for high performing computing. Thorough understanding of network bandwidth and troubleshooting high performance computing systems. Proficiency using next-generation sequencing data analysis tools including GSNAP, BWA, MIRRA, Bowtie, Cufflinks, Stampy , GATK, Freebayes, SNPeff, Pindel. Familiarity with commonly used algorithms for alignment and variant calling. At least 3 years experience in molecular diagnostic techniques including NGS, RNA-seq, and other molecular techniques. Strong Analytical skills. Excellent communication skills (verbal and written) required. Strong statistical understanding.
Requeriments :
Skills :
- Lunix/Unix
- MySQL
- Next Generation Sequencing
- NoSQL
- Programing in C
- Programing in Python
- Programing Skills
- Programming in Java
- Programming in PERL
- Programming in R
- RNA-seq
Areas :
Additional Info:
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