Job ID: 5356
Job date: 2016-03-28
End Date:
Company : Weill Cornell Medical College Country : Role : Research Scientist
Job date: 2016-03-28
End Date:
Company : Weill Cornell Medical College Country : Role : Research Scientist
Job Description:
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Scientific Computing Systems ManagerWeill Cornell Medical CollegeInstitute for Computational BiomedicineUSA-New York-New York City Position Summary: The Scientific Systems Administrator will help expand the capabilities of the Scientific Computing Unit at Weill Cornell Medicine by providing focused High Performance Computing expertise and support for a cohort of investigators working with large-scale, leading edge molecular dynamics applications. Position Activities: In this role, you will: ● In the context of the High-Performance computing environment of the Scientific Unit, provide specialized and dedicated support for computational biophysics applications ● Benchmark, optimize, and help to organize molecular dynamics simulations across all available resources ● Implement centralized dataset curation, provenance tracking, and long-term archival strategies ● Maintain a centralized knowledge base for the specified user base ● Research available tools in the field, compile them to make them centrally available, and educate users about their optimal use ● Optimize use of specialized hardware resources, including GPGPU’s, Xeon Phi, FPGA’s, and other hardware accelerators, including their integration into batch schedulers (ie: SLURM) ● Research available external compute resources, and assist in making these available to researchers ● Write or modify scripts to automate procedures Requirements ● Must have experience running large-scale computational simulations; ● A very high degree of fluency in the Linux operating system, including scripting languages such as bash, ruby or perl; ● Graduate education in in Computational aspects of Chemistry, Physics, Biophysics, or Biochemistry ; ● A working knowledge of networking concepts and use of tools and protocols such as SSH, DNS, DHCP, and LDAP; ● Experience building, installing, and configuring a variety of open-source Linux software packages, especially with complex dependencies, particularly with support for MPI/MVAPICH and other parallelization strategies ● A working knowledge of at least one object-oriented programming language, such as C++ or Java; ● A detailed knowledge of specialized computer hardware, specifically, nvidia GPU-enabled platforms running CUDA applications ● Must have excellent verbal and written communication skills ● Must be willing to participate in on-call rotation and provide after-hours support as needed Highly Desired Requirements ● PhD in Computational aspects of Chemistry, Physics, Biophysics, or Biochemistry ● Experience with Infiniband networking; ● Experience scripting Tcl; ● Experience with CUDA development; ● Experience setting up and maintaining scientific computing clusters and their associated scheduling systems, such as SGE, PBS, or SLURM; ● Experience with linux-based 3D visualizationJob Information Position Type: Academic Professional Reference (Job ID number): Scientific Computing Start Date: ASAP Duration: Full Time Status: openContact InformationWeill Cornell Medical College Institute for Computational Biomedicine Dr. Harel Weinstein haw2002@med.cornell.eduHow To Apply:Email including cover letter and complete documentationRequeriments :
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