Scientific Programmer – Columbia University – New York, NY

Job ID: 5611
Job date: 2016-06-12
End Date:

Company : Columbia University 

Country :

Role : Research Scientist 


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Job Description:
Columbia University is looking for a highly motivated data analyst to establish analytical protocols of large-scale cancer genome sequencing effort to improve personalized cancer care. The effort is a critical part of cancer precision medicine initiative at Columbia University. The candidate will be affiliated with Department of Systems Biology and Irving Cancer Research Center, and collaborate closely with experts in computational biology, next-generation sequencing, cancer genetics, clinical informatics, and cancer pathology in Columbia University Medical Center.

Job responsibilities will include, but are not limited to:
Establish and maintain robust and highly automated computational pipelines to analyze exome and genome sequencing and RNA-Seq of cancer patients to identify somatic mutations and structural variants.
Perform genomic data analysis in pilot projects using optimized pipelines
Participate the drafting of manuscripts to report novel findings from research and clinical projects

Minimum Qualifications for Grade
Applicant MUST meet these minimum qualifications to be considered an applicant

Requires a Bachelor's degree of Science in computational biology, bioinformatics, computer science, or equivalent in education and experience plus 3 years of related experience

Additional Position-Specific Minimum Qualifications
Applicant MUST meet these minimum qualifications to be considered an applicant

Experience in computational analysis of whole genome sequencing, exome sequencing, or RNA-Seq data.
Strong programming skills. Substantial experience in R, Python (or Perl, Ruby), UNIX and high performance computing cluster.
Knowledge of cancer biology or genetics.
Excellent communication skills both writing and speaking.

Special Instructions

Preferred Qualifications

Master degree of Science in computational biology, bioinformatics, computer science, or equivalent
or equivalent in education and experience

Essential Functions

Special Indications

This position works with:
There are no special indications for this position

HIPAA Compliance training required

No

Participation in Medical Surveillance required

No

What type of posting? Is this a waiver request?

Standard Posting

Requisition Open Date

03-25-2015

Requisition Close Date

Open Until Filled

Quick Link

jobs.columbia.edu/applicants/Central?quickFind=147389


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Additional Info:

[Click Here to Access the Original Job Post]