Senior Bioinformatics Analyst (#10673) – Emeryville, CA

Job ID: 89055158
Job date: 2015-11-27
End Date:

Company : Affymetrix 

Country :

Role : Research Scientist 


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Job Description:

At Affymetrix, we are passionate about enabling our customers, scientists, and clinicians to improve human health and wellness by understanding and applying biology for a better world. Our employees bring talent, creativity, collaboration, and energy to what they do. Join us at Affymetrix and make a difference.   Position Summary:   The Bioinformatics group seeks a talented and motivated individual to provide analytical and software support for product research and development efforts.   The successful candidate will work with a small team that manages critical informatics support for the Affymetrix catalog. The Affymetrix catalog is a highly visible and heavily used component of www.affymetrix.com. Applicants will also contribute to the development of new custom designs, and interface with several cross-functional groups at Affymetrix and our scientific customers. Duties will include development of novel data analysis approaches, as well as bioinformatics programming and analysis activities in support of product development.   This position requires familiarity with standard genomics tools, such as high-throughput genomic mapping/alignment, annotation databases, as well as the ability to handle very large bioinformatics datasets and develop automated workflows. The candidate will also have an opportunity to develop web applications. Strong knowledge of bioinformatics databases and tools, and software engineering skills are required while utilizing such tools as Python and/or Perl, Java, and SQL. A desire to learn web production skills and tools is a plus.

Required Qualifications:
  • BS or MS degree in Bioinformatics, Computer Science, or related field plus 8+ years related experience
  • Preferred PhD
  • Solid experience with Java, Python and/or Perl in a Unix environment
  • Experience with SVN or other code versioning systems
  • Solid experience with relational databases, and proficiency with SQL
  • Experience with biological annotation databases, and manipulating data in an efficient manner
  • Excellent communication skills along with the ability to work as part of a team
  • Strong initiative and demonstrated ability to take ownership of assigned tasks
The following qualifications are optional but would be a plus: Linux skills including shell scripting, knowledge of web programming frameworks (eg Django), web architecture and development (eg. AJAX, jQuery, Javascript), experience with cloud computing services such as AWS, experience with Indexing and Search (Lucene/Solr), and NoSQL databases, knowledge of genetics, statistics, microarrays and sequencing.   Competencies: (skills, knowledge, abilities)Interpersonal skills, Results oriented, APL, Life Science, Influencing Program Project Management   Licenses/Certificates: N/A Travel Requirements: As necessary Working Conditions: Office   Level of Autonomy and Complexity:
  • Experienced professional with full comprehension of established principles, theories, concepts to resolve an extensive range of issues
  • Demonstrates good judgment in applying appropriate action resolve issues of diverse scope requiring analysis and evaluation of factors
  • Contributes to establishment of organization's objectives; error in judgment or failure to achieve objectives will have crucial impact and will require extensive addition of resources to correct errors and achieve goals
  • Receives little instruction and creates own methods for resolution of everyday tasks; receives general directions for new projects; work is assessed for achievement of goals


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