Job ID: 569688852
Job date: 2018-01-18
End Date:
Company : Sangamo Therapeutics Country : Role : Technician
Job date: 2018-01-18
End Date:
Company : Sangamo Therapeutics Country : Role : Technician
Job Description:
The successful candidate will work in our Bioinformatics group to enable high throughput screening efforts to find new therapeutic candidates. S/he will be responsible for writing data analysis and processing pipelines supporting translation of R&D efforts into clinical leads. Report To: Associate Director, Bioinformatics Required:
Additional Info:
[Click Here to Access the Original Job Post]
The successful candidate will work in our Bioinformatics group to enable high throughput screening efforts to find new therapeutic candidates. S/he will be responsible for writing data analysis and processing pipelines supporting translation of R&D efforts into clinical leads. Report To: Associate Director, Bioinformatics Required:
- Excellent Python programming skills
- Excellent communication skills with bench scientists
- Familiarity with Linux environment and basic shell scripting (bash, sh, or zsh)
- Experience with at least one open-source SQL database (PostgreSQL, MySQL) and SQL
- Familiarity with NGS formats (FASTQ, SAM, BED) and genomics resources (NCBI, UCSC, EnsEMBL)
- Working knowledge of Illumina sequence processing, aligners, and artifacts
- Familiarity with at least one scientific/statistical graphics programming environment (ggplot2, dash, matplotlib, seaborn, etc.)
- Basic Git / Subversion source code management experience
- Practice of good data / code hygiene for repeatability and documentation
- Statistical training in high-throughput screening analysis
- Knowledge of gene editing techniques
- Experience with directed evolution of DNA/peptides
- Experience with non-Illumina sequencing platforms (PacBio, Oxford Nanopore, Ion Torrent)
- Unit testing (py.test, unittest) experience
- Experience with Django/Flask frameworks and basic web forms
- Basic familiarity with python packaging
- Knowledge of packages / tools in the PyData stack (Pandas, numba, matplotlib, ipython, jupyter, etc.)
- Experience with at least one statically typed language (C/C++, Java, Scala, C#, F#, Go, or Rust)
- Creation and use of Docker containers or other provisioning framework (Chef, Puppet, Ansible, SaltStack, CloudFormation, etc.)
- Familiarity with AWS resources and (EC2, S3, lambda, etc.)
- Workflow engines (Toil, Galaxy, Airflow, Luigi, etc.) and Common Workflow Language
- A minimum of a Bachelor's degree in Life Sciences, Computer Science, Statistics, Bioengineering, or related area.
Requeriments :
Skills :
- Django
- genomic
- Lunix/Unix
- MySQL
- Next Generation Sequencing
- Programing in C
- Programing in C++
- Programing in Python
- Programming in C#
- Programming in Java
- Shell scripting
- SQL
- Statistics
Areas :
Additional Info:
[Click Here to Access the Original Job Post]