Job Description:
The successful candidate will work closely with a team of software developers, bioinformatics scientists, molecular biologists, and immunologists in the exciting and cutting edge field of single-cell genomics and proteomics. She or he will develop, deploy, and support complex data analysis pipelines that enable research, new technology development, and product development. Success requires a firm grounding in software engineering, knowledge of bioinformatics methods, ability to work successfully in teams, and a strong focus on making our customers successful. Duties And Responsibilities:
Additional Info:
Primary Work Location USA CA - Menlo Park Additional Locations USA CA - San Jose Work Shift BD is a global medical technology company that is advancing the world of health by improving medical discovery, diagnostics and the delivery of care. BD leads in patient and health care worker safety and the technologies that enable medical research and clinical laboratories. The company provides innovative solutions that help advance cellular studies and genomics, enhance the diagnosis of infectious disease and cancer, improve medication management, promote infection prevention, equip surgical and interventional procedures and support the management of diabetes. The company partners with organizations around the world to address some of the most challenging global health issues. BD has nearly 50,000 associates across 50 countries who work in close collaboration with customers and partners to help enhance outcomes, lower health care delivery costs, increase efficiencies, improve health care safety and expand access to health. For more information on BD, please visit www.bd.com. [Click Here to Access the Original Job Post]
The successful candidate will work closely with a team of software developers, bioinformatics scientists, molecular biologists, and immunologists in the exciting and cutting edge field of single-cell genomics and proteomics. She or he will develop, deploy, and support complex data analysis pipelines that enable research, new technology development, and product development. Success requires a firm grounding in software engineering, knowledge of bioinformatics methods, ability to work successfully in teams, and a strong focus on making our customers successful. Duties And Responsibilities:
- Contribute to cross-functional teams and work directly with scientists and engineers to understand computational and analytic needs and to insure that insightful results are produced that help achieve departmental research goals.
- Develop and support Python software applications
- Develop, test, deploy, automate, and support NGS analysis pipelines.
- Contribute to end user applications that support visualization and statistical analysis.
- Troubleshoot problems, address issues, and answer questions from internal users, collaborators, and customers
- Work directly with customers on fixes and workarounds
- Benchmark and evaluate pipeline performance, suggest and implement improvements
- Deploy computationally efficient cloud-based technologies to maximize pipeline efficiency.
- Insure that good software engineering practices are followed in all development activities.
- Construct and manage databases. Interact with statisticians, data scientists, engineers and biologists to determine requirements and functionality.
Minimum Qualification
Education and Experience:- Minimum M.S. degree in Biomedical Engineering, Bioinformatics, Computational Biology, Molecular Biology or a related field with 3+ years Bioinformatics analysis experience
- Minimum of 3 years' experience with Python programming and proficiency in data analysis using Python and R.
- Experience implementing NGS data analysis pipelines preferably in a production context.
- Team-oriented
- Strong written and verbal communication
- Able to prioritize and deliver results with a high emphasis on quality, technical rigor, and attention to detail
- Experience with advanced data science techniques especially as applied to RNA or Protein expression data.
- Experience with Linux, shell (e.g. Bash) scripting
- Experience with relational databases (e.g. PostgreSQL) and SQL language
- Experience with any of the following: Agile software development, git, AWS, Seven Bridges, Arvados, Matlab, Javascript, React-JS
Requeriments :
- M.Sc. or higher Degree in Bioinformatics
- M.Sc. or higher Degree in computational biology
- Master's Degree in Engineering
Skills :
- Bioinformatics
- JavaScript
- Lunix/Unix
- Next Generation Sequencing
- Programing in Python
- Programing Skills
- Programming in Matlab
- Programming in R
- Shell scripting
- Statistics
Areas :
Additional Info:
Primary Work Location USA CA - Menlo Park Additional Locations USA CA - San Jose Work Shift BD is a global medical technology company that is advancing the world of health by improving medical discovery, diagnostics and the delivery of care. BD leads in patient and health care worker safety and the technologies that enable medical research and clinical laboratories. The company provides innovative solutions that help advance cellular studies and genomics, enhance the diagnosis of infectious disease and cancer, improve medication management, promote infection prevention, equip surgical and interventional procedures and support the management of diabetes. The company partners with organizations around the world to address some of the most challenging global health issues. BD has nearly 50,000 associates across 50 countries who work in close collaboration with customers and partners to help enhance outcomes, lower health care delivery costs, increase efficiencies, improve health care safety and expand access to health. For more information on BD, please visit www.bd.com. [Click Here to Access the Original Job Post]