Job ID: 00034147
Job date: 2018-02-02
End Date:
Company : University of South Florida Country : Role : Technician
Job date: 2018-02-02
End Date:
Company : University of South Florida Country : Role : Technician
Job Description:
This position will provide programming and analytic support for a wide variety of bioinformatics and genomics research projects under the TEDDY study. Opportunities exist for proving support for other NIH-funded and privately funded type 1 diabetes research and disease prevention projects. RESPONSIBILITIES:
Additional Info:
Dept. Number/Name: 0-6163-000 / Health Informatics Institute College Division: USF Health – Morsani College of Medicine Salary Plan: Administrative Job Code/Title: 9570 / Applications Developer II Hiring Salary/Salary Range: $58,000 - Negotiable Position Number: 00034147 ORGANIZATIONAL SUMMARY: The Health Informatics Institute (HII) is comprised of a diverse team of 25 faculty and more than 150 staff with expertise in bioinformatics, biostatistics, epidemiology, health informatics, computer science, genetics, nutrition, psychology, pediatrics, public health, clinical trials and health services research. With funding from the National Institutes of Health (NIH), Department of Defense, and other sources, the institute has an annual budget exceeding $50 million and provides the technical means to facilitate interaction and contributions in knowledge among physicians and patients throughout the U.S. and international communities. By strengthening this vital network, the institute aims to improve research on many different types of diseases. For more information about the HII, please visit http://hii.usf.edu/ . For more information about the Environmental Determinants of Diabetes in the Young (TEDDY) study, please visit https://teddy.epi.usf.edu/ . Information for Applicants This position is subject to a criminal background check. Posting End Date : Open Until Filled How To Apply Click on the Apply Now button. When applying to an opening you will have the opportunity to upload a cover letter and resume. Apply online by completing the required information and attaching your cover letter and resume. Please include your experience as it relates to the qualifications stated above. YOUR COVER LETTER AND RESUME, PLUS ANY OTHER REQUESTED MATERIAL, MUST BE IN ONE ATTACHMENT. Only online applications are accepted for this position. Click here for additional tutorial information. Equal Employment Opportunity USF is an equal opportunity, equal access academic institution that embraces diversity in the workplace. Work Location Campus map and location overview: USF - Health USF - Tampa Campus About USF The University of South Florida System is a high-impact, global research system dedicated to student success. The USF System includes three institutions: USF; USF St. Petersburg; and USF Sarasota-Manatee. The institutions are separately accredited by the Commission on Colleges of the Southern Association of Colleges and Schools. All institutions have distinct missions and their own detailed strategic plans. Serving over 48,000 students, the USF System has an annual budget of $1.6 billion and an annual economic impact of $4.4 billion. USF is a member of the American Athletic Conference. Working at USF With more than 16,000 employees in the USF System, the University of South Florida is one of the largest employers in the Tampa Bay region. At USF you will find opportunities to excel in a rich academic environment that fosters the development and advancement of our employees. We believe in creating a talented, engaged and driven workforce through on-going development and career opportunities. We also offer a first class benefit package that includes medical, dental and life insurance plans, retirement plan options, tuition program and generous leave programs and more. To learn more about working at USF please visit: Work Here. Learn Here. Grow Here.[Click Here to Access the Original Job Post]
This position will provide programming and analytic support for a wide variety of bioinformatics and genomics research projects under the TEDDY study. Opportunities exist for proving support for other NIH-funded and privately funded type 1 diabetes research and disease prevention projects. RESPONSIBILITIES:
- Provide broad-based programming and analytic support for a wide variety of bioinformatics and genomics research projects.
- Work collaboratively with faculty and staff to design, develop, deploy and maintain open source software, scripts and automated pipelines facilitating the research and development process within the TEDDY research group.
- Implement, design, maintain and document data analysis pipelines and workflows.
- Develop code in the R and Python/Perl programming languages for the analysis and graphical representation of complex data.
- Work with systems and solutions architects to coordinate development efforts throughout the data lifecycle.
- Apply best practices to the design, development, implementation and maintenance of programs.
- Maintain detailed and organized records of project design, implementation and other materials as needed.
- Two (2) years professional programming experience in Python, Perl, R (Bioconductor), SQL, Java, Bash or similar.
- Comfortable developing scripts in a Linux environment, experienced in the Linux/UNIX set of tools (including advanced use of grep, awk, and sed) and adept at both adhoc scripting as well as collaboration utilizing a Version Control System (e.g. Git, Mercurial, or Subversion).
- Comfortable developing, deploying, and debugging multi-step, automated pipelines utilizing Bash, Python, Perl and other open source software.
- Experience in compiling and troubleshooting open source software.
- Knowledge of and experience with the R and Python/Perl programming languages.
- Experience working in a high-performance computing (HPC) environment including developing and deploying applications on Linux platforms, compiling open-source software, and troubleshooting HPC pipelines utilizing the SLURM scheduler.
- Demonstrated experience in data lifecycle management, logical and physical data modeling, the systems development lifecycle and related concepts, object-oriented programming and design, Big Data concepts and their implementation.
- Excellent analytical, interpersonal, organizational, and time management skills.
- Self-motivated and able to work and learn new technologies independently.
- Proven critical-thinking skills and demonstrated ability to manage and interpret large biological data sets.
- Team-oriented with excellent verbal and written communications skills to interact with both scientific personnel and IT professionals required.
Requeriments :
Skills :
- HPC
- Lunix/Unix
- Programing in Python
- Programing Skills
- Programming in Java
- Programming in PERL
- Programming in R
- Software Design
- SQL
- Version Control
Areas :
Additional Info:
Dept. Number/Name: 0-6163-000 / Health Informatics Institute College Division: USF Health – Morsani College of Medicine Salary Plan: Administrative Job Code/Title: 9570 / Applications Developer II Hiring Salary/Salary Range: $58,000 - Negotiable Position Number: 00034147 ORGANIZATIONAL SUMMARY: The Health Informatics Institute (HII) is comprised of a diverse team of 25 faculty and more than 150 staff with expertise in bioinformatics, biostatistics, epidemiology, health informatics, computer science, genetics, nutrition, psychology, pediatrics, public health, clinical trials and health services research. With funding from the National Institutes of Health (NIH), Department of Defense, and other sources, the institute has an annual budget exceeding $50 million and provides the technical means to facilitate interaction and contributions in knowledge among physicians and patients throughout the U.S. and international communities. By strengthening this vital network, the institute aims to improve research on many different types of diseases. For more information about the HII, please visit http://hii.usf.edu/ . For more information about the Environmental Determinants of Diabetes in the Young (TEDDY) study, please visit https://teddy.epi.usf.edu/ . Information for Applicants This position is subject to a criminal background check. Posting End Date : Open Until Filled How To Apply Click on the Apply Now button. When applying to an opening you will have the opportunity to upload a cover letter and resume. Apply online by completing the required information and attaching your cover letter and resume. Please include your experience as it relates to the qualifications stated above. YOUR COVER LETTER AND RESUME, PLUS ANY OTHER REQUESTED MATERIAL, MUST BE IN ONE ATTACHMENT. Only online applications are accepted for this position. Click here for additional tutorial information. Equal Employment Opportunity USF is an equal opportunity, equal access academic institution that embraces diversity in the workplace. Work Location Campus map and location overview: USF - Health USF - Tampa Campus About USF The University of South Florida System is a high-impact, global research system dedicated to student success. The USF System includes three institutions: USF; USF St. Petersburg; and USF Sarasota-Manatee. The institutions are separately accredited by the Commission on Colleges of the Southern Association of Colleges and Schools. All institutions have distinct missions and their own detailed strategic plans. Serving over 48,000 students, the USF System has an annual budget of $1.6 billion and an annual economic impact of $4.4 billion. USF is a member of the American Athletic Conference. Working at USF With more than 16,000 employees in the USF System, the University of South Florida is one of the largest employers in the Tampa Bay region. At USF you will find opportunities to excel in a rich academic environment that fosters the development and advancement of our employees. We believe in creating a talented, engaged and driven workforce through on-going development and career opportunities. We also offer a first class benefit package that includes medical, dental and life insurance plans, retirement plan options, tuition program and generous leave programs and more. To learn more about working at USF please visit: Work Here. Learn Here. Grow Here.[Click Here to Access the Original Job Post]